PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Vang01g15310.1
Common NameLR48_Vigan07g246400
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
Family ERF
Protein Properties Length: 243aa    MW: 27336.1 Da    PI: 4.4846
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Vang01g15310.1genomeSNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP251.91.9e-163886355
             AP2  3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                    ykGVr +k +g+Wv+eIr p++   r r++lg+++t  +Aa+a +aa  +l+g
  Vang01g15310.1 38 YKGVRKRK-WGKWVSEIRLPNS---RERIWLGSYDTQVKAARAFDAALYCLRG 86
                    9****999.**********933...5**********99*************98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS512575135No hitNo description
SMARTSM003807.0E-2737100IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.106.2E-283795IPR001471AP2/ERF domain
PROSITE profilePS5103221.2463794IPR001471AP2/ERF domain
SuperFamilySSF541714.58E-193795IPR016177DNA-binding domain
CDDcd000184.02E-273896No hitNo description
PfamPF008472.3E-93886IPR001471AP2/ERF domain
PRINTSPR003671.7E-83849IPR001471AP2/ERF domain
PRINTSPR003671.7E-86076IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 243 aa     Download sequence    Send to blast
MVKPAITRVD SSSSSSSSPT SCNDSFSTNN SSAACKMYKG VRKRKWGKWV SEIRLPNSRE  60
RIWLGSYDTQ VKAARAFDAA LYCLRGKGAS FNFPDTPHLF EMESLKIPCS HQEIQEVAAK  120
FANKVVEILA EEEEEDGEVG VQSESMSDHT THTETNTTFP IYDGGTNNDV RVDQDTMDWT  180
FMNMLDDLNG SDFGLYFEAE KGEFLCPTTH TPLLFHNGDE IEVDDHDHDA FSNHSFLWSW  240
NF*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
13844KGVRKRK
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150360.0AP015036.1 Vigna angularis var. angularis DNA, chromosome 3, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_014504212.11e-160PREDICTED: ethylene-responsive transcription factor ERF018-like
SwissprotQ84QC24e-39ERF17_ARATH; Ethylene-responsive transcription factor ERF017
TrEMBLA0A0L9V0V30.0A0A0L9V0V3_PHAAN; Uncharacterized protein
STRINGGLYMA14G12505.12e-95(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF14793399
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G19210.11e-39ERF family protein
Publications ? help Back to Top
  1. Yang K, et al.
    Genome sequencing of adzuki bean (Vigna angularis) provides insight into high starch and low fat accumulation and domestication.
    Proc. Natl. Acad. Sci. U.S.A., 2015. 112(43): p. 13213-8
    [PMID:26460024]